Report for Sequence Feature Glyma10g26160
Feature Type: gene_model
Chromosome: Gm10
Start: 34254207
stop: 34257209
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma10g26160
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G34930 AT
Annotation by Michelle Graham. TAIR10: disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905
SoyBase E_val: 7.00E-142 ISS
GO:0006952 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response
SoyBase N/A ISS
GO:0007165 GO-bp
Annotation by Michelle Graham. GO Biological Process: signal transduction
SoyBase N/A ISS
GO:0050832 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response to fungus
SoyBase N/A ISS
GO:0005618 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cell wall
SoyBase N/A ISS
KOG0472
KOG
Leucine-rich repeat protein
JGI ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24420:SF473 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00560 PFAM
Leucine Rich Repeat
JGI ISS
PF08263 PFAM
Leucine rich repeat N-terminal domain
JGI ISS
UniRef100_G7ZWZ6 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Receptor-like protein kinase n=1 Tax=Medicago truncatula RepID=G7ZWZ6_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1LAM8 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1LAM8_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma10g26160
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma10g26160 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.10g129400 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma10g26160
Coding sequences of Glyma10g26160
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma10g26160.2 sequence type=CDS gene model=Glyma10g26160 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCTTGGCTTGGCTTTTGCTGTTGTTTTCCTTTTAACTGCATTTGTAGTGTTATCTTCATGTGGTCATTCACCACTTGGCTGCAATGAAGAAGAAAGGCATGCTCTTCAATGGATCAAAGGAAGCTTCAAAGATCCATCATCGAGGCTTTCCTCTTGGGAAGAAGAGGATTGTTGTCAATGGAAAGGTGTAGTTTGCAGCAATATTACAGGACATGTTGTCAAGCTGGACCTCAGGAATCCTTGCTTCCCACAAAAGAACCAAGGAGGTCAACCAAACTGTGACTTCAACAAATATGTTCTTGAAGCTAATCATGTTCATCCTTCTATATCGCAGCTTAAATATCTCACTTATTTAGATTTGAGTGGAAACAAATTTAATAGTTCAATACCAATGTTCATCCAAACTATGGAGCATCTGCAATTCCTTTCTCTCTCTGATTGTCATTTTAGTGGGAGGATCCCTTACAATCTTGGGAACCTTACAAAATTGATCCTTCTTGATTTCAGCTTCAATCCTCTTCTGTATGCTGATGACTTTTATTGGATTTCTCAACTTTCATCACTCCAATACCTTTACATGCGTGATGTGCCTCTTGGTAAGGCACAAAATTTGTTGCAGGCACTCAGCATGCTTCCTTCTTTGTTAGAAATAGAATTGAGGAATTGTGGACTAAACAAGTTACACACTTATCAACTTGTTAGAGCCACAAACCTTTCCCGAGTGGAGGTTCTGGATCTAGCAGAAAATGAACTTCAAGCTCCAATTCTGAATGCTTTTCAAAACATGTCTTCCATTGCAGAGATTGACTTTTCTTTCAACAACCTGAGTTCCACTCCATTCTGGTTGGGAACCTGTAGTAATCTGGTCTATCTATCTGTTGAAAATAATGCTCTTTATGGCTCACTTCCATCTACTTTACAGAATCTGACTTCCTTGATTTACCTCGACCTTTCAGAAAACAATTTAGATTCTGTTCCATCCTGGTTAGGTGAGTTAAAGGGTCTTCAATCCTTGTATCTTTCAGGCAATGATTTAAAACATATTGAAGGATCTCTAGCATCTTTTCTGGGAAACTGTTGTCATCTTCATTCATTAGATATGTCAAGTAACAATCTTAAAGGAGATGCACTTGGAGTCTACATACGGTCTGGATGCATTAGGTATGATTTAATGCAATTGGATTTGAGTCACAATGAATTTAATGATAGTTTGCCACCATGGTTGGGACAACTTGAAAATCTATCTGACTTGTATATTCATGACAGTAATTTGGTTGGGAACCTTCCTTGTGATATGATAACAAAACTTATCAATCTGAAGAAGTTGGTACTTTCCAATAACAACTTAAACGGGTGTCTTCCTAACTGTATTGGCCAACTTCTGAATTTAAACACCTTAATTCTTTCTTCTAATCATTTTCATGGTGTCATTCCTAGGAGTCTAGAGCAACTTGTAAGCCTAAAATCTCTAGATCTTTCAAGAAACTGTTTAAACGGTACAATTCCCCAAAATATTGGTCAACTTAAAAATTTGATCACCCTCTATCTTTTTGATAATAATTTACATGGAAACATACCTTATAGTCTTGGTCAACTTCTAAACCTGCAAAACTTTGACATGTCCCTAAATCATTTGGAGAGTTCGGTGTCTGACATAAGATGGCCTAAGCAACTTGTTTACCTGAACCTCACCAATAACAATATCACTGGGTCACTTCCACAAGATATTGCTGATAGGTTGCCCAATGTTAGTCACTTGCTTTTTGGAAACAACCTTATAAATGGTTCCATTCCAAATTCATTGTGCAAAATAGACTCCTTGTACAATCTTGACCTTTCAAGCAACTTGTTATCTGGTGACATTCCTGATTTTTGGAGTGCTACTCAAAGTCTCAATGTGTTAAATTTGGCATCCAACAAATTATCAGGTGTTATTCCAAGCTCTCTCGGTAACCTACCCACGTTGGCATGGTTTCATTTGAACAATAACAGTCTTCAGGGTGGGATTCCATCATCTTTGAGAAATTTAAAGCAACTTTTAATTCTGGATCTAGGAGAGAACCATCTGTCTGGGATTATACCTTTATGGATGGGGAACATTTTCTCCTCAATGCAGATTCTAAGGCTACGGCAAAACATGTTGATTGGAAAAATTCCTTCACAACTATGCCAACTTTCTGCACTGCAAATCTTGGACCTTTCAAACAACAACCTGATGGGATCAATCCCTCACTGCATTGGAAATCTCACAGCAATGATTTCAGGAAAGAAATCTTCTGTCATCCAACCTAGTGAAGAGCATAGAGATGTTGAATGGTATGAACAAGAGGTCAGACAAGTCATTAAAGGAAGGGAACTTGACTATACCAGAAATCTAAAACTGGTAGCCAACATGGACTTGTCAAATAACAATTTGAGTGGTACTATTCCTGAAGGAATAGCATTGCTTTCTGCATTGCAAGGCCTAAATCTATCACACAATTATCTGTCAGGACATATCCCTAAAAGGATAGGGGACATGAAATCTCTAGAATCTCTTGACCTCTCTCATGACCAACTTTCAGGCACAATTTCCGACAGCATATCAAGTTTAACTTCGTTAAGCCACTTGAATTTGTCCTACAACAATCTTTCAGGACCCATTCCAAGAGGAACTCAATTGTCAACCCTTGATGATCCTTTTATTTATACGGGCAACCAATTTCTCTGTGGGCCTCCTATGCCAAACGAGTGTTCTCCTGATGATTCCCTACATGACAATGTAGATGAAGATGAAGATGGCAAAAAGGATAAAGTAGAGAAATTGTGGTTTTACTTTGTCATTGCCCTTGGCTATGCTCTTGGATTTTGGGCTGTGATTGGAAGCTTGTTGATTAAGACAAGTTGGAGGCGTTCTTACTTTCAATACATTGACGACTCAACTCAAAGGATAAATGTATCATGGGCAATACATTTATCAAATTTCAAGGCAAGATTTATAGGAAGCCCTGTTGCTGAGTGA
Predicted protein sequences of Glyma10g26160
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma10g26160.2 sequence type=predicted peptide gene model=Glyma10g26160 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLGLAFAVVFLLTAFVVLSSCGHSPLGCNEEERHALQWIKGSFKDPSSRLSSWEEEDCCQWKGVVCSNITGHVVKLDLRNPCFPQKNQGGQPNCDFNKYVLEANHVHPSISQLKYLTYLDLSGNKFNSSIPMFIQTMEHLQFLSLSDCHFSGRIPYNLGNLTKLILLDFSFNPLLYADDFYWISQLSSLQYLYMRDVPLGKAQNLLQALSMLPSLLEIELRNCGLNKLHTYQLVRATNLSRVEVLDLAENELQAPILNAFQNMSSIAEIDFSFNNLSSTPFWLGTCSNLVYLSVENNALYGSLPSTLQNLTSLIYLDLSENNLDSVPSWLGELKGLQSLYLSGNDLKHIEGSLASFLGNCCHLHSLDMSSNNLKGDALGVYIRSGCIRYDLMQLDLSHNEFNDSLPPWLGQLENLSDLYIHDSNLVGNLPCDMITKLINLKKLVLSNNNLNGCLPNCIGQLLNLNTLILSSNHFHGVIPRSLEQLVSLKSLDLSRNCLNGTIPQNIGQLKNLITLYLFDNNLHGNIPYSLGQLLNLQNFDMSLNHLESSVSDIRWPKQLVYLNLTNNNITGSLPQDIADRLPNVSHLLFGNNLINGSIPNSLCKIDSLYNLDLSSNLLSGDIPDFWSATQSLNVLNLASNKLSGVIPSSLGNLPTLAWFHLNNNSLQGGIPSSLRNLKQLLILDLGENHLSGIIPLWMGNIFSSMQILRLRQNMLIGKIPSQLCQLSALQILDLSNNNLMGSIPHCIGNLTAMISGKKSSVIQPSEEHRDVEWYEQEVRQVIKGRELDYTRNLKLVANMDLSNNNLSGTIPEGIALLSALQGLNLSHNYLSGHIPKRIGDMKSLESLDLSHDQLSGTISDSISSLTSLSHLNLSYNNLSGPIPRGTQLSTLDDPFIYTGNQFLCGPPMPNECSPDDSLHDNVDEDEDGKKDKVEKLWFYFVIALGYALGFWAVIGSLLIKTSWRRSYFQYIDDSTQRINVSWAIHLSNFKARFIGSPVAE*